Statistical Modelling 21 (1-2) (2021), 161–181

Sequential Monte Carlo methods in Bayesian joint models for longitudinal and time-to-event data

Danilo Alvares,
Department of Statistics,
Pontificia Universidad Católica de Chile,
Macul,
Chile
e-mail: dalvares@mat.uc.cl

Carmen Armero,
Department of Statistics and O.R.,
Universitat de València,
Burjassot,
Spain


Anabel Forte,
Department of Statistics and O.R.,
Universitat de València,
Burjassot,
Spain


Nicolas Chopin,
Centre for Research in Economics and Statistics,
ENSAE,
Palaiseau,
France


Abstract:

The statistical analysis of the information generated by medical follow-up is a very important challenge in the field of personalized medicine. As the evolutionary course of a patient's disease progresses, his/her medical follow-up generates more and more information that should be processed immediately in order to review and update his/her prognosis and treatment. Hence, we focus on this update process through sequential inference methods for joint models of longitudinal and time-to-event data from a Bayesian perspective. More specifically, we propose the use of sequential Monte Carlo (SMC) methods for static parameter joint models with the intention of reducing computational time in each update of the full Bayesian inferential process. Our proposal is very general and can be easily applied to most popular joint models approaches. We illustrate the use of the presented sequential methodology in a joint model with competing risk events for a real scenario involving patients on mechanical ventilation in intensive care units (ICUs).

Keywords:

Bayesian analysis; IBIS algorithm; Joint models; sequential inference.

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Example data, code and supplementary material in zipped archive.
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